This short paper presents an educational approach to teaching three popular methods for encoding DNA sequences: one-hot encoding, binary encoding, and integer encoding. Aimed at bioinformatics and computational biology students, our learning intervention focuses on developing practical skills in implementing these essential techniques for…

Enzymes are nature's catalysts, mediating chemical processes in living systems. The study of enzyme function and mechanism includes defining the maximum catalytic rate and affinity for substrate/s (among other factors), referred to as enzyme kinetics. Enzyme kinetics is a staple of biochemistry curricula and other disciplines, from molecular and…

The authors present a Web application they designed in the R programming language as an experiential learning tool for teaching production theory. The app simulates production decisions where a manager is tasked to find the optimal mixture of inputs through experimentation. Users of the application are instructed to use calculations and intuitions…

The article presents an open educational resource (OER) to introduce humanities students to data analysis with Python. The article beings with positioning the OER within wider pedagogical debates in the digital humanities. The OER is built from our research encounters and committed to computational thinking rather than technicalities. Furthermore,…

There have been a few methods described in this journal and elsewhere for measuring the wavelength of the standing electromagnetic waves in a microwave oven. Typically, these involve melting chocolate, cheese, or some other substance on a plate that is prevented from rotating. In this article I describe a more dynamic and colorful technique that…

Efficient visualizations of computational algorithms are important tools for students, educators, and researchers. In this article, we point out an innovative visualization technique for matrix multiplication. This method differs from the standard, formal approach by using block matrices to make computations more visual. We find this method a…

In this paper we present two simulations designed with GeoGebra that illustrate dynamically a key concept in Vector Calculus: line integrals of vector fields, along with other associated mathematical properties and applications. Students are not required to know the GeoGebra environment: a user-friendly interface with buttons, functionalities and…

The goal of this paper is to promote the use of R and Python as high-level, free, open-source programming environments that can be used as a computational and visualization tool for teaching differential equations. Both R and Python also allow for creating reproducible dynamic documents using Markdown, which combines live code, plain text, and…

This paper develops the ideas of "The Pedagogical Power of Context: Iterative Calculus Methods and the Epidemiology of Eyam" (French "et al." 2018 "J. Phys. Educ."), where we considered the application of the Euler method to solve epidemiological problems. Our purpose was to convey some examples of school level work…

Gravitational lensing is an interesting phenomenon in astronomy and is most typically given rise to by galaxies. The majority of the matter in a galaxy is thought to be dark matter, and the galactic gravitational lensing effect is mainly caused by dark matter halos. In gravitational lensing-related demonstrations in physics education, the feet of…

The "Yet Another extended Hu¨ckel Molecular Orbital Package" (YAeHMOP) has been merged with the Avogadro open-source molecular editor and visualizer. It is now possible to perform YAeHMOP calculations directly from the Avogadro graphical user interface for materials that are periodic in one, two, or three dimensions, and to visualize…

Computational thinking is a problem-solving technique traditionally employed by computer scientists to develop computer applications. However, computational thinking practices are now believed to be applicable to other fields (Google for Education, 2018), specifically those related to engineering and technology. Accordingly, the Advancing…

We find several applications of the Dynamic System Geogebra--DSG related predominantly to the basic mathematical concepts at the context of the learning and teaching in Brasil. However, all these works were developed in the basic level of Mathematics. On the other hand, we discuss and explore, with DSG's help, some applications of the polynomial's…

Heterogeneity in response styles can affect the conclusions drawn from rating scale data. In particular, biased estimates can be expected if one ignores a tendency to middle categories or to extreme categories. An adjacent categories model is proposed that simultaneously models the content-related effects and the heterogeneity in response styles.…

Students sometimes struggle with visualizing the three-dimensional solids encountered in certain integral problems in a calculus class. We present a project in which students create solids of revolution with clay on a pottery wheel and estimate the volumes of these objects using Riemann sums. In addition to giving students an opportunity for…