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Montgomery, Jason M.; Mazziotti, David A. – Journal of Chemical Education, 2020
An introduction to the Quantum Chemistry Package (QCP), implemented in the computer algebra system Maple, is presented. The QCP combines sophisticated electronic structure methods and Maple's easy-to-use graphical interface to enable computation and visualization of the electronic energies and properties of molecules. Here we describe how the QCP…
Descriptors: Chemistry, Physics, Computation, Computer Uses in Education
Miller, Daniel P.; Phillips, Adam; Ludowieg, Herbert; Swihart, Sarah; Autschbach, Jochen; Zurek, Eva – Journal of Chemical Education, 2019
A computational laboratory experiment investigating molecular models for hexagonal boron-carbon-nitrogen sheets (h-BCN) was developed and employed in an upper-level undergraduate chemistry course. Students used the Avogadro user interface for molecular editing and the WebMO interface for the quantum computational workflow. Density functional…
Descriptors: Computer Uses in Education, Laboratory Experiments, Science Experiments, College Science
Ragno, Rino; Esposito, Valeria; Di Mario, Martina; Masiello, Stefano; Viscovo, Marco; Cramer, Richard D. – Journal of Chemical Education, 2020
The increasing use of information technology in the discovery of new molecular entities encourages the use of modern molecular-modeling tools to help teach important concepts of drug design to chemistry and pharmacy undergraduate students. In particular, statistical models such as quantitative structure--activity relationships (QSAR)--often as its…
Descriptors: Chemistry, Computer Uses in Education, Pharmaceutical Education, Graduate Students
Cruzeiro, Vinícius Wilian D.; Roitberg, Adrian; Polfer, Nicolas C. – Journal of Chemical Education, 2016
In this work we are going to present how an interactive platform can be used as a powerful tool to allow students to better explore a foundational problem in quantum chemistry: the application of the variational method to the dihydrogen molecule using simple Gaussian trial functions. The theoretical approach for the hydrogen atom is quite…
Descriptors: Science Instruction, Chemistry, Computer Uses in Education, Graduate Study
Rossi, Sergio; Benaglia, Maurizio; Brenna, Davide; Porta, Riccardo; Orlandi, Manuel – Journal of Chemical Education, 2015
A simple procedure to convert protein data bank files (.pdb) into a stereolithography file (.stl) using VMD software (Virtual Molecular Dynamic) is reported. This tutorial allows generating, with a very simple protocol, three-dimensional customized structures that can be printed by a low-cost 3D-printer, and used for teaching chemical education…
Descriptors: Visual Aids, Models, Printing, Chemistry
Martin, Christopher B.; Vandehoef, Crissie; Cook, Allison – Journal of Chemical Education, 2015
A hands-on activity appropriate for first-semester general chemistry students is presented that combines traditional VSEPR methods of predicting molecular geometries with introductory use of molecular modeling. Students analyze a series of previously calculated output files consisting of several molecules each in various geometries. Each structure…
Descriptors: Chemistry, Hands on Science, Science Activities, Molecular Structure
Coles, S. J.; Mapp, L. K. – Journal of Chemical Education, 2016
An undergraduate practical exercise has been designed to provide hands-on, instrument-based experience of advanced characterization techniques. A research experience approach is taken, centered around the concept of solid-state polymorphism, which requires a detailed knowledge of molecular and crystal structure to be gained by advanced analytical…
Descriptors: College Science, Undergraduate Study, Chemistry, Science Instruction
Orsini, Gabriele – Journal of Chemical Education, 2015
The ever-increasing impact of molecular quantum calculations over chemical sciences implies a strong and urgent need for the elaboration of proper teaching strategies in university curricula. In such perspective, this paper proposes an extensive project for a student-driven, cooperative, from-scratch implementation of a general Hartree-Fock…
Descriptors: Science Instruction, College Science, Graduate Study, Chemistry
Ramakrishnan, Raghunathan – Journal of Chemical Education, 2013
A program is described and presented to readily plot the molecular orbitals from a Huckel calculation. The main features of the program and the scope of its applicability are discussed through some example organic molecules. (Contains 2 figures.)
Descriptors: Organic Chemistry, Computation, Molecular Structure, Computer Uses in Education
Sales, Eric S.; Silveira, Gustavo P. – Journal of Chemical Education, 2015
Lactone-size identification of [subscript D]-ribonolactone derivatives has been debated for four decades due to complex lactone-ring rearrangements and acetal migration. This laboratory experiment for an upper-division undergraduate organic chemistry laboratory course describes a fast and reliable assignment of lactone-size derivatives from…
Descriptors: Science Instruction, Spectroscopy, Science Laboratories, Laboratory Experiments
Robertson, Michael J.; Jorgensen, William L. – Journal of Chemical Education, 2015
Orbital theory provides a powerful tool for rationalizing and understanding many phenomena in chemistry. In most introductory chemistry courses, students are introduced to atomic and molecular orbitals in the form of two-dimensional drawings. In this work, we describe a general method for producing 3D printing files of orbital models that can be…
Descriptors: Organic Chemistry, Visual Aids, Theories, Molecular Structure
Litofsky, Joshua; Viswanathan, Rama – Journal of Chemical Education, 2015
Matrix diagonalization, the key technique at the heart of modern computational chemistry for the numerical solution of the Schrödinger equation, can be easily introduced in the physical chemistry curriculum in a pedagogical context using simple Hückel molecular orbital theory for p bonding in molecules. We present details and results of…
Descriptors: Science Instruction, Chemistry, Equations (Mathematics), Teaching Methods
Hii, King Kuok; Rzepa, Henry S.; Smith, Edward H. – Journal of Chemical Education, 2015
The coupling of a student experiment involving the preparation and use of a catalyst for the asymmetric epoxidation of an alkene with computational simulations of various properties of the resulting epoxide is set out in the form of a software toolbox from which students select appropriate components. At the core of these are the computational…
Descriptors: Organic Chemistry, Laboratory Experiments, Science Experiments, College Science
Clark, Ted M.; Chamberlain, Julia M. – Journal of Chemical Education, 2014
An activity supporting the PhET interactive simulation, Models of the Hydrogen Atom, has been designed and used in the laboratory portion of a general chemistry course. This article describes the framework used to successfully accomplish implementation on a large scale. The activity guides students through a comparison and analysis of the six…
Descriptors: Simulation, Science Laboratories, Science Instruction, Molecular Structure
Nassabeh, Nahal; Tran, Mark; Fleming, Patrick E. – Journal of Chemical Education, 2014
A set of exercises for use in a typical physical chemistry laboratory course are described, modeling the unimolecular dissociation of the ethyl radical to form ethylene and atomic hydrogen. Students analyze the computational results both qualitatively and quantitatively. Qualitative structural changes are compared to approximate predicted values…
Descriptors: Science Instruction, Computation, Chemistry, Science Laboratories