In the environment, communication among microorganisms is a key aspect of their lives. Through communication, single cells of a microbial population can coordinate their gene expression and, in consequence, their physiology. Quorum sensing systems (QS) are one of these mechanisms that allow this communication through the production and detection…

Chemistry experiments involving biological aspects are in high demand. This laboratory exercise blends biochemistry and physical chemistry, illustrates key concepts of the virus capsid surface, and is designed for a chemistry laboratory course for students majoring in biology in college. The experimental part provides a mastery of…

The COVID-19 outbreak has disrupted undergraduate students' experiments since their access to the laboratory is limited. To address this problem, the bacteria and detergent residues on undergraduate students' dinner plates were investigated by the students in the dormitories. Five different types of dinner plates from 50 students were collected,…

It has become increasingly important for microbiology educators to help students learn critical concepts of the discipline. This is particularly true in virology, where current challenges include increasing rates of vaccine hesitancy, misinformation about the COVID-19 pandemic, and controversy surrounding research on pathogens with pandemic…

Decomposition of organic matter controls the flow of carbon and nutrients in terrestrial and aquatic ecosystems. Several kinetic laws have been proposed to describe decomposition rates, but they neglect adaptation of the microbial decomposer to environmental conditions. Here we formalise decomposition as an optimal control problem by assuming that…

Short chain fatty acids (SCFAs) are produced in the gut as a result of microbial action on ingested dietary fiber and have been associated with several health benefits. Herein an undergraduate student experiment that uses gas chromatography equipped with either a flame ionization detector or mass spectrometer for the analysis and quantitation of…

New approaches to microbiology education are needed to ensure equitable representation in microbiology and to build literacy in microbiology and science broadly. To address this goal, we developed a course held at the collegiate level that uniquely integrated microbiology, Indigenous studies, science and technology studies, and arts and…

Perturbation of gene expression using RNA interference (RNAi) or CRISPR interference (CRISPRi) is a useful strategy to explore the function of essential genes. In the archaeon "Haloferax volcanii," the CRISPR-Cas system has been adapted as a CRISPRi tool to silence the expression of specific genes. We developed a laboratory class (LC) to…

Antimicrobial resistance (AMR) is a global threat to human health. Education on antibiotics is essential for AMR prevention, and training should be provided for undergraduate pharmacy students. This study evaluated the knowledge regarding antibiotic use and AMR among fourth-year Japanese pharmacy students and the effect of a lecture on treating…

In a typical undergraduate biology curriculum, students do not dive into research until they first wade through large amounts of content. Biology courses in the first few years of the college curriculum tend to be lecture-based and exam-based courses. As a result, science students are mainly exposed to content knowledge--not the skills scientists…

In response to the shifting modalities of laboratory-based education, particularly amidst the rise of virtual and at-home instruction, we introduce a novel hybrid laboratory module for undergraduate biochemistry and biology courses. Central to this innovative approach is the use of sourdough as a versatile and accessible model organism, enabling a…

With the growing importance of the field of RNA biology, undergraduates need to perform RNA-related research. Systematic evolution of ligands by exponential enrichment (SELEX) has become an important method in RNA biology. The principles of SELEX were applied to a semester-long course-based undergraduate research experience (CURE) in which two…

Based on a growing understanding of the many benefits of undergraduate research, advocacy for undergraduate research experiences has increased, with an emphasis on implementing course-based undergraduate research experiences (CUREs). To understand existing efforts to promote undergraduate research as well as challenges to implementation on higher…

Undergraduate institutions serve as stepping stones to students' careers. Teaching and learning in science classrooms require quality and integrated teaching-research learning experiences that prepare students to advance their careers. Using publicly available data sets and open-access data analyses software can be impactful for engaging students…

The coronavirus disease 2019 (COVID-19) pandemic has underscored the importance of mRNA vaccines. The mechanism for how such vaccines work is related to the core biology topic of the central dogma, which students often misunderstand despite its importance. Therefore, we wanted to know whether students can apply their biology knowledge of central…