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Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2013
The experiment described in this test was aimed at identifying DNA repair proteins in human and yeast cells. Terms to be familiar with before you start to solve the test: DNA repair, germline mutation, somatic mutation, inherited disease, cancer, restriction endonuclease, radioactive labeling, [alpha-[superscript 32]P]ATP, [gamma-[superscript…
Descriptors: Genetics, Science Experiments, Multiple Choice Tests, Problem Solving
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2012
Transcription termination comes in two forms in "E. coli" cells. Rho-dependent termination requires the binding of a termination protein called Rho factor to the transcriptional machinery at the terminator region, whereas Rho-independent termination is achieved by conformational changes in the transcript itself. This article presents a test…
Descriptors: Biology, Science Instruction, Science Experiments, Molecular Biology
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2012
Terms to be familiar with before you start to solve the test: DNA replication, nitrogen isotopes, density labeling, cesium chloride density gradient centrifugation, ultraviolet absorption, DNA denaturation, circular and linear DNA, superspiralization, superhelical DNA, and template.
Descriptors: Genetics, Science Instruction, Vocabulary, Scientific Concepts
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2013
Terms to be familiar with before you start to solve the test: Maxam-Gilbert sequencing, Sanger sequencing, gel electrophoresis, DNA synthesis reaction, polymerase chain reaction, template, primer, DNA polymerase, deoxyribonucleoside triphosphates, orthophosphate, pyrophosphate, nucleoside monophosphates, luminescence, acid anhydride bond,…
Descriptors: Science Instruction, Problem Based Learning, Problem Solving, Teaching Methods
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2011
Terms to be familiar with before you start to solve the test: ion exchange chromatography, polynucleotides, oligonucleotides, radioactive labeling, template, primer, DNA polymerase, reverse transcriptase, helicase, nucleoside triphosphates, nucleoside diphosphates, nucleoside monophosphates, nucleosides, 5'-end and 3'-end, bacteriophage,…
Descriptors: Genetics, Problem Solving, Molecular Biology, Biochemistry
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2010
Terms to be familiar with before you start to solve the test: genetic code, translation, synthetic polynucleotide, leucine, serine, filter precipitation, radioactivity measurement, template, mRNA, tRNA, rRNA, aminoacyl-tRNA synthesis, ribosomes, degeneration of the code, wobble, initiation, and elongation of protein synthesis, initiation codon.…
Descriptors: Genetics, Problem Solving, Molecular Biology, Laboratory Experiments
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2010
Terms to be familiar with before you start to solve the test: ribosome, ribosomal subunits, antibiotics, point mutation, 16S, 5S, and 23S rRNA, Shine-Dalgarno sequence, mRNA, tRNA, palindrome, hairpin, restriction endonuclease, fMet-tRNA, peptidyl transferase, initiation, elongation, termination of translation, expression plasmid, transformation,…
Descriptors: Problem Based Learning, Science Tests, Molecular Biology, Microbiology
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2011
The term "restriction endonuclease mapping" covers a number of related techniques used to identify specific restriction enzyme recognition sites on small DNA molecules. A method for restriction endonuclease mapping of a 1,000-basepair (bp)-long DNA molecule is described in the fictitious experiment of this test. The most important fact needed to…
Descriptors: Genetics, Problem Solving, Biochemistry, Molecular Biology
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2009
The "fos" proto-oncogene codes for a component of the AP1 transcription factor, an important regulator of gene expression and cell proliferation. Dysregulation of AP1 function may lead to the malignant transformation of the cell. The present test describes an experiment in which the role of a micro-RNA (miR-7b) in the regulation of "fos" gene…
Descriptors: Genetics, Cancer, Role, Molecular Biology
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2010
This paper presents a problem-solving test that deals with the regulation of the "trp" operon of "Escherichia coli." Two mutants of this operon are described: in mutant A, the operator region of the operon carries a point mutation so that it is unable to carry out its function; mutant B expresses a "trp" repressor protein unable to bind…
Descriptors: Problem Solving, Genetics, Microbiology, Science Tests
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2009
Phosphorylation of proteins by protein kinases is an important mechanism in the regulation of protein activity. Among hundreds of protein kinases present in human cells, PKA, the first kinase discovered, belongs to the most important and best characterized group of these enzymes. The author presents an experiment that analyzes the "in vitro"…
Descriptors: Molecular Biology, Biochemistry, Laboratory Experiments, Test Items
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2009
Terms to be familiar with before you start to solve the test: polymerase chain reaction, DNA amplification, electrophoresis, breast cancer, "HER2" gene, genomic DNA, "in vitro" DNA synthesis, template, primer, Taq polymerase, 5[prime][right arrow]3[prime] elongation activity, 5[prime][right arrow]3[prime] exonuclease activity, deoxyribonucleoside…
Descriptors: Cancer, Chemistry, Genetics, Molecular Biology
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2008
Terms to be familiar with before you start to solve the test: cytokines, cytokine receptors, cDNA library, cDNA synthesis, poly(A)[superscript +] RNA, primer, template, reverse transcriptase, restriction endonucleases, cohesive ends, expression vector, promoter, Shine-Dalgarno sequence, poly(A) signal, DNA helicase, DNA ligase, topoisomerases,…
Descriptors: Genetics, Problem Based Learning, Molecular Biology, Science Experiments
Szeberenyi, Jozsef – Biochemistry and Molecular Biology Education, 2008
The classic experiment presented in this problem-solving test was designed to identify the template molecules of translation by analyzing the synthesis of phage proteins in "Escherichia coli" cells infected with bacteriophage T4. The work described in this test led to one of the most seminal discoveries of early molecular biology: it dealt a…
Descriptors: Genetics, Biochemistry, Molecular Biology, Problem Solving